PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12209.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 406aa MW: 44680.3 Da PI: 5.5902

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl OVA12209.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.7e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l OVA12209.1 67 RGKFSIQEEQNIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SIQEEQNIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPVTHKPKS ATLSSIDGQQ VKNESNLSHM AQWESARLEA EARLVRESKL RSTTATSFLH 180 DHQLGSSSSA LNSAQAAPWQ QQQGLWSKSN KGFDLDESPT STLTFSENSS LPVLTVGLSD 240 PTASIEFMGN SGNSEGVLTI KEEGHDHEEE LKSFGKLNGF LEYKERLLEN SAMTLSSTVF 300 HEMVMFNDQE DHGGQWTTSA GESTKNEPIM NNFIDGFTDL LLAGGNSSSS DGTNTGGGGG 360 GGGDQSDNNN GECSDDNGYE QEISKDYWNN ILNLVNSSSP SDSPVF

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SIQEEQNIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPVTHKPKS ATLSSIDGQQ VKNESNLSHM AQWESARLEA EARLVRESKL RSTTATSFLH  180
DHQLGSSSSA LNSAQAAPWQ QQQGLWSKSN KGFDLDESPT STLTFSENSS LPVLTVGLSD  240
PTASIEFMGN SGNSEGVLTI KEEGHDHEEE LKSFGKLNGF LEYKERLLEN SAMTLSSTVF  300
HEMVMFNDQE DHGGQWTTSA GESTKNEPIM NNFIDGFTDL LLAGGNSSSS DGTNTGGGGG  360
GGGDQSDNNN GECSDDNGYE QEISKDYWNN ILNLVNSSSP SDSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-111	MYB family protein