PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12286.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 664aa MW: 75679.9 Da PI: 8.8034

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22	3.8e-07	472	513	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W eE ell ++++++++g +W+ +++++g+gR+ +++ OVA12286.1 472 KPWGREEVELLRKGIQKYPKGtsrRWEVVSEYIGTGRSVEEI 513 68***********************************99876 PP
2	Myb_DNA-binding	27.7	6.3e-09	607	650	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ OVA12286.1 607 VWSAVQERALVQALKTFPKEtnqRWERVAAAVP-GKTVNQCKKKF 650 6******************************.******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MVTQQKFRLI SYSKEIVDGQ PIYVSSNCLP VKAVNFEPAG HAFHSAALQL LGVCEEEEVQ 60 ADDQNVSGDK GQSYFASSDS YSSKGKKKSG GGNQQQDHYA LLGLGHLRFL ATEEQIRKSY 120 RETALKHHPD KQASLLLAEE TEAAKEVKKD EIENHFKSIQ EAYEVLMDPV RRRIYDSTDE 180 FDDEVPTDCA PQDFFKVFGP AFMRNGRWSV IQPVPSLGED NTPVKEVDSF YDFWYSFKSW 240 REFPHADEFD LEQAESRDHK RWMERQNSKL REKARKEEYA RVRSLVDNAY KRDPRILRRK 300 DEEKAEKKRK KEAKFLAKKL QEEEAARAAE EERLRKEEED RQAAQAALNQ KKLKEKEKKL 360 LRKERTRLRT VSASLVSRHL FDLTEDDVES LCMSFEIDQL RSLCNELERK PEGIERAQLL 420 KIALGRSSDD FKGTKKDEKN QQQNGSPEVN RNGVGVQPKV ENPLQSYEKK EKPWGREEVE 480 LLRKGIQKYP KGTSRRWEVV SEYIGTGRSV EEILKATKTV LLQKPDSAKA FDSFLEKRKP 540 APTIASPLTT RQESDGIISP SNGPEANGSK MVGSPEKSSS SSNGGQQSPE SGVTVSGGSS 600 SSVEQDVWSA VQERALVQAL KTFPKETNQR WERVAAAVPG KTVNQCKKKF ALMKENFRNK 660 KNVD

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MVTQQKFRLI SYSKEIVDGQ PIYVSSNCLP VKAVNFEPAG HAFHSAALQL LGVCEEEEVQ  60
ADDQNVSGDK GQSYFASSDS YSSKGKKKSG GGNQQQDHYA LLGLGHLRFL ATEEQIRKSY  120
RETALKHHPD KQASLLLAEE TEAAKEVKKD EIENHFKSIQ EAYEVLMDPV RRRIYDSTDE  180
FDDEVPTDCA PQDFFKVFGP AFMRNGRWSV IQPVPSLGED NTPVKEVDSF YDFWYSFKSW  240
REFPHADEFD LEQAESRDHK RWMERQNSKL REKARKEEYA RVRSLVDNAY KRDPRILRRK  300
DEEKAEKKRK KEAKFLAKKL QEEEAARAAE EERLRKEEED RQAAQAALNQ KKLKEKEKKL  360
LRKERTRLRT VSASLVSRHL FDLTEDDVES LCMSFEIDQL RSLCNELERK PEGIERAQLL  420
KIALGRSSDD FKGTKKDEKN QQQNGSPEVN RNGVGVQPKV ENPLQSYEKK EKPWGREEVE  480
LLRKGIQKYP KGTSRRWEVV SEYIGTGRSV EEILKATKTV LLQKPDSAKA FDSFLEKRKP  540
APTIASPLTT RQESDGIISP SNGPEANGSK MVGSPEKSSS SSNGGQQSPE SGVTVSGGSS  600
SSVEQDVWSA VQERALVQAL KTFPKETNQR WERVAAAVPG KTVNQCKKKF ALMKENFRNK  660
KNVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	311	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein