PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12289.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 282aa MW: 32072.6 Da PI: 9.042

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	86	138	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +h +Er+RR+ + + + Lr+llP+ ++K s + + +A++YI++Lq OVA12289.1 86 KKIMHRDVERQRREAMANLYKSLRSLLPHeY---LKGKRSIGDHVNEATKYIRNLQ 138 5789***********************77...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MNYISPNLCP LHQSHELLSF QSSSNPYCQD QHKIHEDHML LVSPPNTLGG CIILPTRQNK 60 SSRCRRRRLS LTAEGGTDTA DLNKRKKIMH RDVERQRREA MANLYKSLRS LLPHEYLKGK 120 RSIGDHVNEA TKYIRNLQNK IQELGEKRDR MKIKLSSASS NNSSTTADQH HHHHPDVERA 180 ISFPDHHHLN RVAVTVQQCL VGIEIVISYC ELGFGGVGSS VFSLSKVLDQ LVHEEGLNVI 240 SCVSTKVQQT SFHTILSETL DYVKFTNIDE LPVILNLIFK IK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	87	RRRRLSLTAEGGTDTADLNKRKK
2	66	88	RRRRLSLTAEGGTDTADLNKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12540.1	5e-31	bHLH family protein