PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12383.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 182aa MW: 19951.5 Da PI: 8.4115

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.5	1.5e-45	15	114	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l++lp ++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la +++ OVA12383.1 15 PCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQA 113 7**********************************************************************************************9987 PP DUF260 100 e 100 e OVA12383.1 114 E 114 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MKENTSRKGG GAASPCAACK LLRRRCAQDC VFAPYFPADE PQKFANVHKV FGASNVNKML 60 QELPVHQRGD AVSSMVYEAN ARVRDPVYGC VGAISSLQQQ IDVLQTQLAI AQAEVVHMRM 120 RQTASSISNN DHHHHHHHHH NEHHSASPNS SSKLITPHST KSLLALDMVV DQASMGASLW 180 SC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	4e-77	LBD family protein