PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12523.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CO-like

Protein Properties

Length: 357aa MW: 40026.7 Da PI: 6.0903

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.3	1.2e-06	56	99	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 +C+ +e ++++ C+ + lC +C ++H+ H ++p OVA12523.1 56 LVCEACECAPASFSCKADAAALCISCDAKIHSAnalarrHHRIP 99 68*****************************6688888966665 PP
2	CCT	70.8	3.4e-24	288	331	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ OVA12523.1 288 REARVLRYREKRKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 331 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MLKEAVGSGG WTRVCDSCRA AACAVYCQAD SAYLCIRCDT CIHAVNSGVW MHERVLVCEA 60 CECAPASFSC KADAAALCIS CDAKIHSANA LARRHHRIPI LPITGFLREP TAAHPGKHFG 120 PHVHVEDGFL AHKVEEEEEE EDETTSWLLL NPVKNKNQSN NGFLFGNEVE EYLDLDEYNS 180 CTENNSQYYV NDSVVPVQCG TVKEKQQQQE QQQNLQSDME FEASKSGFNY TTSISHSVSF 240 SSVDTSVVPD TANVNEISNS HVRPPKGTID LFSSPPFQMP TQFSSVDREA RVLRYREKRK 300 TRKFEKTIRY ASRKAYAETR PRIKGRFAKR TDAEFEVDQM FSSTLMSENG YGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MLKEAVGSGG WTRVCDSCRA AACAVYCQAD SAYLCIRCDT CIHAVNSGVW MHERVLVCEA  60
CECAPASFSC KADAAALCIS CDAKIHSANA LARRHHRIPI LPITGFLREP TAAHPGKHFG  120
PHVHVEDGFL AHKVEEEEEE EDETTSWLLL NPVKNKNQSN NGFLFGNEVE EYLDLDEYNS  180
CTENNSQYYV NDSVVPVQCG TVKEKQQQQE QQQNLQSDME FEASKSGFNY TTSISHSVSF  240
SSVDTSVVPD TANVNEISNS HVRPPKGTID LFSSPPFQMP TQFSSVDREA RVLRYREKRK  300
TRKFEKTIRY ASRKAYAETR PRIKGRFAKR TDAEFEVDQM FSSTLMSENG YGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	4e-89	CO-like family protein