PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12661.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 223aa    MW: 24163.4 Da    PI: 8.948
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.32.3e-42431421100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+Ca++C+++pyf  ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA++r+rdPvyG++g i++lqqq+++l+ael+++++
  OVA12661.1  43 PCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRA 141
                 7***********************************************************************************************998 PP

      DUF260 100 e 100
                 e
  OVA12661.1 142 E 142
                 7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MSRDRERFDH EIGKKIKRES DASDRMGRRP LLGPPGTLNT ITPCAACKLL RRRCAQECPF  60
SPYFSPHEPQ KFASVHKVFG ASNVSKMLME VPENQRADAA NSLVYEANVR LRDPVYGCMG  120
AISALQQQVQ SLQAELNAVR AEILKYRYSH NINLPSSHAA LLSPGGVVSV AAPSPSLSPV  180
SVPTPPPPPP PPPASSSSSM YTPPPSSTTD YSSISNENVS YFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.17e-81LBD family protein