PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12770.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CO-like

Protein Properties

Length: 395aa MW: 44369.8 Da PI: 5.9559

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.4	9.2e-06	21	55	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.H 37 r C+ + + +C+ ++ +lC +C H H OVA12770.1 21 RLCDSCRSAACAVYCQADSAYLCTNCDARVHAAnH 55 68****99****************9995563 PP
2	zf-B_box	29.4	1.7e-09	63	108	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC +C e+H+ H +vp+ OVA12770.1 63 VWVCEACENAPAAFTCKADAAALCTSCDAEIHSAnplarrHHRVPI 108 689*****************************66899999877775 PP
3	CCT	70.6	3.9e-24	326	369	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ OVA12770.1 326 REARVLRYREKRKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 369 9*****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MLKESRSSRG GGNGGGGGWA RLCDSCRSAA CAVYCQADSA YLCTNCDARV HAANHVASRH 60 ERVWVCEACE NAPAAFTCKA DAAALCTSCD AEIHSANPLA RRHHRVPILP IHGCLYGTSS 120 ATHFSNPFGS EPNLENGLFD PEMAEEVEEE DEDETASWLL LNPLKNNPNA NDNNNNNNNN 180 NSNNQSVNNG YLFGGEVDEY LDLVDYNNND HQNQYLDHHY NQQMQHQQNN FDEKKMKNDR 240 MSDSVVPMQH QHQQNNLQLE MDYETIKAGF GYTTSIIHTV SMDTSIVPDS TTNDISNSHS 300 RPSKGTIDLF SSPPIQMPPQ FSPMDREARV LRYREKRKTR KFEKTIRYAS RKAYAETRPR 360 IKGRFAKRTD AEVEVDQMFS NTVIAESGYS IVPSF

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MLKESRSSRG GGNGGGGGWA RLCDSCRSAA CAVYCQADSA YLCTNCDARV HAANHVASRH  60
ERVWVCEACE NAPAAFTCKA DAAALCTSCD AEIHSANPLA RRHHRVPILP IHGCLYGTSS  120
ATHFSNPFGS EPNLENGLFD PEMAEEVEEE DEDETASWLL LNPLKNNPNA NDNNNNNNNN  180
NSNNQSVNNG YLFGGEVDEY LDLVDYNNND HQNQYLDHHY NQQMQHQQNN FDEKKMKNDR  240
MSDSVVPMQH QHQQNNLQLE MDYETIKAGF GYTTSIIHTV SMDTSIVPDS TTNDISNSHS  300
RPSKGTIDLF SSPPIQMPPQ FSPMDREARV LRYREKRKTR KFEKTIRYAS RKAYAETRPR  360
IKGRFAKRTD AEVEVDQMFS NTVIAESGYS IVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	9e-94	CO-like family protein