PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12776.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16234.7 Da PI: 9.7809

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.3	4.2e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrngi+KKA+E+ vLCda+v+++ifsstgk+ +y+s OVA12776.1 9 KRIENSTNRQVTYSKRRNGIIKKAKEITVLCDAKVSLVIFSSTGKMTDYCS 59 79***********************************************96 PP
2	K-box	73.5	5.9e-25	71	140	1	70
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 yqkssgk+l++ak+e+l+ e++++kke++++q e+Rhl+GedL+sL+ keL +e++Le++ ++R+k+ OVA12776.1 71 YQKSSGKKLWDAKHEYLSAEVDRIKKENDTMQIELRHLKGEDLTSLQPKELIPIEKALEDGYDRVRAKQA 140 899****************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIEIKR IENSTNRQVT YSKRRNGIIK KAKEITVLCD AKVSLVIFSS TGKMTDYCSP 60 SSSLIEILDR YQKSSGKKLW DAKHEYLSAE VDRIKKENDT MQIELRHLKG EDLTSLQPKE 120 LIPIEKALED GYDRVRAKQA SC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	2e-72	MIKC_MADS family protein