PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12846.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family ARF
Protein Properties Length: 961aa    MW: 105853 Da    PI: 5.4199
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.51.5e-24148249199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae+       ++++++ ++l++ d++ +sW++++iyr++++r++lt+GW+ Fv a++L++gD v+F   ++++ +l+
  OVA12846.1 148 FCKTLTASDTSTHGGFSVPRRAAEKLfppldySMQPPT-QELIVHDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVGAKRLRAGDAVLFI--RDEKSQLM 243
                 99*********************999*****9555554.49************************************************..4577778* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 v+v+r+
  OVA12846.1 244 VGVRRA 249
                 ****97 PP
2Auxin_resp70.26.3e-24274333159
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrl 59 
                 aahaa+++s+F+++YnPra++seFv+++ k++ka++ ++vsvGmRf m++ete+s +rr+
  OVA12846.1 274 AAHAAANRSPFTIFYNPRACPSEFVIPLTKYQKAVYgTQVSVGMRFGMMLETEESGKRRY 333
                 79**********************************9*********************98 PP
3Auxin_resp28.75.5e-113804065783
  Auxin_resp  57 rrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  r++Gtvvg+sdldp+rWp SkWr+L+
  OVA12846.1 380 SRYMGTVVGISDLDPLRWPSSKWRNLQ 406
                 689**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 961 aa     Download sequence    
MVSVEEKNKT PVGLVNMGTP TLLEEMKALK EFQDQSGARK TINSELWHAC AGPLVSLPQA  60
GSLVYYFPQG HSEQVAASTK RAATTHIPNY PNLPSQLMCQ VHNVTLHADK DTDEIFAQMT  120
LQPVNSEKDV FPFPDFGLKT SKHPTEFFCK TLTASDTSTH GGFSVPRRAA EKLFPPLDYS  180
MQPPTQELIV HDLHDNSWTF RHIYRGQPKR HLLTTGWSVF VGAKRLRAGD AVLFIRDEKS  240
QLMVGVRRAN HQQTALPSSV LSADSMHFGV LAAAAHAAAN RSPFTIFYNP RACPSEFVIP  300
LTKYQKAVYG TQVSVGMRFG MMLETEESGK RRYFPELPHL ISFTISQTSL VPFCSIRNQC  360
DSGITFDELT HLGSFSLPIS RYMGTVVGIS DLDPLRWPSS KWRNLQVEWD EVGCGEKQNR  420
VSLWEIETPE SLFIFPSLTS SLKRPVHTGY ADSDWGNLFK RPYVRGLENG NGDFPYSPFP  480
GIGSEQLAKM FPKPPIAGPV GAFSAASYLP PCVTKGTPLL EGDTLAKTLA LQKSQFFPSE  540
DTSFQNHNPR QNYFDLPQAM KANLLSQTLA PEKFLPPSKV ENQSSPKPCI EKPETAPMMA  600
SNQLSQLNSS AKCTEENLVG SPLNSQNVIN QLSFPNQGTL TTQTSPQLVQ QQLEPNTLHQ  660
HQIDALQLDT SNPNGLLPYP INLSSQYLDS DDWMLHSGQS LAGILRSPGQ QSGCGLEDLP  720
VAYPEMVNPV ATSLGQEMWG PQLNYLRYLS QEQELAPCLQ RVPSALQGFP NSCGFRDFSE  780
DSKDQSEIYS GLHFEASNGG STIVDPSVSS AALDGICSLG DAGFQSRPCL VGNFSSNQDV  840
QSQITSASLV DSQAFSLQEI QDNSGGTSSS NIDLDDTSLL KNGSWQQISA PLRTYTKVQK  900
LGSVGRSIDV TRFKNYDELK SAIACMFGLD GLLDDPRGSA WKLVYVDYEN DVLLVGDDPW  960
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein