PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA12952.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 296aa    MW: 33661.8 Da    PI: 4.6871
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA12952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.93.3e-07174217755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + r+RR++i ++ ++L +l+P        +++ ae+ + A +Y+k+Lq
  OVA12952.1 174 VAARQRRRKISEKTQQLGKLIPGG-----SRMNTAEMFQAAFKYVKYLQ 217
                 677*******************95.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MMMNSSTNYQ QKQVEVDELL LDFYSCNNNL ITSTPASPLL NTENNPTIED FFYNTVNTNH  60
LLPYYDPLLS FTPEIIPLDD FHSTYNNQYP KRQRSYINDN CYSDFTVLNN YFNEYSSLNN  120
YPSSHQFLLP EFLYPPQTSI NIEAAPIAPL CSVDDVENNG NKKSNSGYLS AQSVAARQRR  180
RKISEKTQQL GKLIPGGSRM NTAEMFQAAF KYVKYLQAQV GILELMGSIQ ENKNLSLSSS  240
SSLEVLLAST TIQEKLYSEE KCLIPKEFVE IVAKDHEIQS HPLISKDINS LVPLET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.19e-27bHLH family protein