PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12971.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 590aa MW: 64166.1 Da PI: 6.9449

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	1e-08	395	442	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OVA12971.1 395 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 442 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MEKERYFLNS GSPPSLSFGA SSSSPLTMDV QVGELNCSSE QLPNCFLNLN WENSMDQSVP 60 FESALSSIVS SPVQSNSSVP AESVVIRELI GRLGSICNSG EISPQSHTMG GGSYMGGNNS 120 TNTSCYSTPL NSPPKLNLSM MDHQVRGNLP IQGNSMSSHP TLAPFPSDPG FAERAARFSC 180 FGTRNFGGLS TQFGINEPEL PYRSTPRVEN GKLSRVSSSQ SLKAAGSQMG NQENKEFPLQ 240 DMLDTEMRSA SGSDRRFSRF SRSSTPEKGE FNNAHEDSSA SEQIPAGENG LKGSNDVNAR 300 KRKAVPRGKA KDLPSFPSTK DIKTAEEDNS NAKRSKSGDA SGNEKDSGKA KGEPNGSSNT 360 AGEGSQKNSK ENQKPPEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKFLQDLVPG 420 CNKVTGKAVM LDEIINYVQS LQRQVEFLSM KLSTVNPRLD FNMETLLSKD ILQSRGSFPH 480 PIYPLDSSAS AFPYGHQPHP HGPNLQNGIS NGTENHCSVN PLDAALRRNL SMQLPPLDGF 540 CESASQLGTF WEDDLQSVVQ MGFGQNQGRE MVFQSQNSQG LPSTHMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MEKERYFLNS GSPPSLSFGA SSSSPLTMDV QVGELNCSSE QLPNCFLNLN WENSMDQSVP  60
FESALSSIVS SPVQSNSSVP AESVVIRELI GRLGSICNSG EISPQSHTMG GGSYMGGNNS  120
TNTSCYSTPL NSPPKLNLSM MDHQVRGNLP IQGNSMSSHP TLAPFPSDPG FAERAARFSC  180
FGTRNFGGLS TQFGINEPEL PYRSTPRVEN GKLSRVSSSQ SLKAAGSQMG NQENKEFPLQ  240
DMLDTEMRSA SGSDRRFSRF SRSSTPEKGE FNNAHEDSSA SEQIPAGENG LKGSNDVNAR  300
KRKAVPRGKA KDLPSFPSTK DIKTAEEDNS NAKRSKSGDA SGNEKDSGKA KGEPNGSSNT  360
AGEGSQKNSK ENQKPPEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKFLQDLVPG  420
CNKVTGKAVM LDEIINYVQS LQRQVEFLSM KLSTVNPRLD FNMETLLSKD ILQSRGSFPH  480
PIYPLDSSAS AFPYGHQPHP HGPNLQNGIS NGTENHCSVN PLDAALRRNL SMQLPPLDGF  540
CESASQLGTF WEDDLQSVVQ MGFGQNQGRE MVFQSQNSQG LPSTHMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	5e-77	bHLH family protein