PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13031.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 228aa MW: 26534.1 Da PI: 9.2246

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.7e-19	89	143	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Le+ F+++++p+ ++++eLA++l+L rqV vWFqNrRa+ k OVA13031.1 89 RKKLRLTKEQSALLESSFKEHNTPNMAQKQELAERLDLRPRQVEVWFQNRRARTK 143 788899***********************************************98 PP
2	HD-ZIP_I/II	115.2	3.9e-37	89	177	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLE+sF+e+++ + +K+ela++L+l+prqv+vWFqnrRARtk+k++E+d+e+Lk+++++lkeen+rL+ke +eLr+ OVA13031.1 89 RKKLRLTKEQSALLESSFKEHNTPNMAQKQELAERLDLRPRQVEVWFQNRRARTKLKKTEVDCEVLKKCCESLKEENRRLKKELQELRS 177 69*************************************************************************************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MGEEEEECDI GLSLRLGSGE YTSRRTDERK RQVQLNFLFP SHPKKEIVDY EVHDDDRSSS 60 KTVNQNEEHA IKKDNTSVNS HINKYGTTRK KLRLTKEQSA LLESSFKEHN TPNMAQKQEL 120 AERLDLRPRQ VEVWFQNRRA RTKLKKTEVD CEVLKKCCES LKEENRRLKK ELQELRSIKF 180 GLPSPFYVQL PKTAALTVCP TCERIAKTST TDDKNNMVLD VMGKSNKF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	94	TRKKLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	6e-57	HD-ZIP family protein