PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13226.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 189aa    MW: 21368.3 Da    PI: 10.4279
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.32.2e-2239132190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 +fY++Y++e GF++ k++s+k+ + +e  +  f+Cs++g ++++ ++    +k +r++++ +t+Cka++ + ++  + +w+v +++ +HnH+++
  OVA13226.1  39 DFYQDYGREKGFTIHKRSSYKTAKGKELSRVLFTCSCQGVHKPKLSSneqPNKIKRNTSTMKTDCKASMFLALDPkSRTWYVRSFVDDHNHAMV 132
                 6*****************************************9988855556677899999*************9899*************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MATSEGIETT NDVQTPKSNK NPKKPFVGMD FSSIEEAQDF YQDYGREKGF TIHKRSSYKT  60
AKGKELSRVL FTCSCQGVHK PKLSSNEQPN KIKRNTSTMK TDCKASMFLA LDPKSRTWYV  120
RSFVDDHNHA MVTPSKRVLM RSNRYMHPAA KSLAEAFNKE KLRVGKVPSI FGGGSSNVSF  180
NSRDEMPKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.21e-15FAR1 family protein