PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13245.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 332aa    MW: 36664.2 Da    PI: 8.1149
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-135599147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       OVA13245.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 99
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MVSVNPNPEE TGFYLDPMGV AALQGIGSSI QTSTTSSSED LSKKIRKPYT ITKSRESWTE  60
QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKVQKNGTSE HVPPPRPKRK  120
AAHPYPQKAS KNAPVLSQVM GPFQSSSALL EPGYVLRPDS SSMLTNSNTS PAVSSWAHNS  180
APQANVSHVT KADDLGSTQP TVANNCCSST ESTPRKWPTC ETADQGNHGP PLRVMPDFSQ  240
VYSFIGSVFD PNTTGHLRKL KEMDPIDVET VLLLMRNLSV NLLSPDFEDH RRLLSSYEVD  300
SEKAKSEAAL ITSHADPSEN TPPFQVGRKI RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-92MYB_related family protein