PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13257.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 469aa MW: 51446.1 Da PI: 7.7757

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.6	1.4e-08	13	56	4	45
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT e d+ + +a + + +W++Ia+ ++ g+t +++++++ OVA13257.1 13 WTREQDKAFENALVVNPEDsidRWEKIAEAVP-GKTVEEIQHHYE 56 ******************************.********95 PP
2	Myb_DNA-binding	39.5	1.3e-12	123	167	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky OVA13257.1 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 167 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MNTDENMGHS SLWTREQDKA FENALVVNPE DSIDRWEKIA EAVPGKTVEE IQHHYELLVE 60 DINSIESGLV PLPNYISTSE GSTDHAGEGG TSKKGIHLGH FQSDSNHGSK ASRSDQERRK 120 GIAWTEDEHR LFLLGLDKYG KGDWRSISRN FVVSRTPTQV ASHAQKYFIR LNSMNKDRRR 180 SSIHDITSVG SGDVATPQGP ITGQTNGPTA GGSSSKSTKQ QPQPPPSAPG VGVYGAPTIG 240 QPIGGPLISA VGTPVNLPPP AHMAYGVRAP VPGHMVPGAP TSMPPMTYPM PHRCLGYLQS 300 MEDDELWNGY DSGPLVTIDP VFYVFPELSN FSELLSKEPL NHPVLWSLDS YRVLTSESLM 360 EHPSLRCAPA PNYAPTLPLQ RQGSREKAEL SRLSSPGLVR IACTAILFCI WPTLQILHRT 420 YITLKIIGYN FGKWYQGEKA MKNKGSTDIM FGAVAKKAYA KMKEQGHRA

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MNTDENMGHS SLWTREQDKA FENALVVNPE DSIDRWEKIA EAVPGKTVEE IQHHYELLVE  60
DINSIESGLV PLPNYISTSE GSTDHAGEGG TSKKGIHLGH FQSDSNHGSK ASRSDQERRK  120
GIAWTEDEHR LFLLGLDKYG KGDWRSISRN FVVSRTPTQV ASHAQKYFIR LNSMNKDRRR  180
SSIHDITSVG SGDVATPQGP ITGQTNGPTA GGSSSKSTKQ QPQPPPSAPG VGVYGAPTIG  240
QPIGGPLISA VGTPVNLPPP AHMAYGVRAP VPGHMVPGAP TSMPPMTYPM PHRCLGYLQS  300
MEDDELWNGY DSGPLVTIDP VFYVFPELSN FSELLSKEPL NHPVLWSLDS YRVLTSESLM  360
EHPSLRCAPA PNYAPTLPLQ RQGSREKAEL SRLSSPGLVR IACTAILFCI WPTLQILHRT  420
YITLKIIGYN FGKWYQGEKA MKNKGSTDIM FGAVAKKAYA KMKEQGHRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-110	MYB family protein