PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13308.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WRKY

Protein Properties

Length: 627aa MW: 67827.1 Da PI: 6.5531

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13308.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.5e-30	255	314	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed++++++tYeg+Hnh+ OVA13308.1 255 MNDGCQWRKYGQKISKGNPCPRAYYRCTVAaGCPVRKQVQRCAEDKSILITTYEGTHNHP 314 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MEETMKRSSG LVGVVVVKEE KGVDHHESIN NCVEEEEEEE EDHVGEIIRK DNNSRPSSPN 60 QKNSDISEQE DQLESTKAEM GEVREENERL KTTLARVLKD YQSLQTHFFD IVQQDQTNKK 120 PTSQSAPIIH QAIHHEETDL ISLTLGRRTS SDLKKDDKNS SSSKSKDYHE ELNNEGLALG 180 LDCKFEVTNK AGTAEHVMYP SSENSFGDSK EEIGEQWQSG KGGKNIRSGD DEVSQQNPTK 240 KPRVSVRTRC DTPTMNDGCQ WRKYGQKISK GNPCPRAYYR CTVAAGCPVR KQVQRCAEDK 300 SILITTYEGT HNHPLSVSAT AMASTTSAAA SMLMSGSSSS SRLTLGGSAS TTTTLANLHG 360 LNFNLSAGSK QFYLPNSSSL SSSSSYPTIT LDLTTPSSSS ALSSLSHFNR LSTNNINFPT 420 TTHRYSSTSF NFSSSDSNST ILPTSTYWGN NGYLSYGTHQ SYKQNQIGSL NLSRQNSQEL 480 QFYQPYMIKN NNPSPPQQSL NDTIAAATKA ITSDPSFQSA LVSAISTIVG GGGAAGSTHG 540 NQLGGGGNFG KNLKWSGDQF PAISTHPSTS NGNACASSYL NVSSASGSSS TSHQEGNNLM 600 FLPSALPFSS SKSASVSPVD DSRDHIK

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MEETMKRSSG LVGVVVVKEE KGVDHHESIN NCVEEEEEEE EDHVGEIIRK DNNSRPSSPN  60
QKNSDISEQE DQLESTKAEM GEVREENERL KTTLARVLKD YQSLQTHFFD IVQQDQTNKK  120
PTSQSAPIIH QAIHHEETDL ISLTLGRRTS SDLKKDDKNS SSSKSKDYHE ELNNEGLALG  180
LDCKFEVTNK AGTAEHVMYP SSENSFGDSK EEIGEQWQSG KGGKNIRSGD DEVSQQNPTK  240
KPRVSVRTRC DTPTMNDGCQ WRKYGQKISK GNPCPRAYYR CTVAAGCPVR KQVQRCAEDK  300
SILITTYEGT HNHPLSVSAT AMASTTSAAA SMLMSGSSSS SRLTLGGSAS TTTTLANLHG  360
LNFNLSAGSK QFYLPNSSSL SSSSSYPTIT LDLTTPSSSS ALSSLSHFNR LSTNNINFPT  420
TTHRYSSTSF NFSSSDSNST ILPTSTYWGN NGYLSYGTHQ SYKQNQIGSL NLSRQNSQEL  480
QFYQPYMIKN NNPSPPQQSL NDTIAAATKA ITSDPSFQSA LVSAISTIVG GGGAAGSTHG  540
NQLGGGGNFG KNLKWSGDQF PAISTHPSTS NGNACASSYL NVSSASGSSS TSHQEGNNLM  600
FLPSALPFSS SKSASVSPVD DSRDHIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-58	WRKY family protein