PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13322.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 509aa MW: 57239.7 Da PI: 8.3178

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.3e-14	21	65	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l d ++ +G+++W+ Ia+++ +t qc+ rw++yl OVA13322.1 21 TWTPQEDDILRDQINIHGTENWAIIASKFK-DKTTRQCRRRWYTYL 65 6**************************9.***********97 PP
2	Myb_DNA-binding	43	1e-13	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT++Ed ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + OVA13322.1 71 KGGWTPQEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 114 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MKRHEAPKSE TTKQKERHIV TWTPQEDDIL RDQINIHGTE NWAIIASKFK DKTTRQCRRR 60 WYTYLNSDFK KGGWTPQEDM LLCEAQKIFG NRWTEIAKVV SGRTDNAVKN RFTTLCKKRA 120 KNQTISKENK SLCVNPNNKR VISQNGFFTN GTSESAAPLK KMRTQVSDVT ENCNPKGRSL 180 GECGTTENQQ LRPPFTVIRQ NSHGVGDLPA QQHVSNTTST ASNDVRKNKE QGTFIKRDDP 240 RITVLMQQAE LLSSLAAKVN AENNNQTLEN AWKELQDYLN QTHKSDLYRE DFPETDFRLE 300 DFKDLVEDLK SSTIGSRLYW RQRDLHEDSP GSSEYSTEST LQSHTAGEKT ERPQAEVCSL 360 HQGAGVEPQT VHILVDNYSG GCEDGFTGTS VAYVRPQLIR REAENGGDAG RLEGFRTGTN 420 VAQVAFLPSS KEPKDNDGLI SALSNTEFSS PIQVTPLFRT FAAAIPSPRF SESERNFLLK 480 TLGSETLSPN PSPNPSQPPP CRRSLLQSL

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MKRHEAPKSE TTKQKERHIV TWTPQEDDIL RDQINIHGTE NWAIIASKFK DKTTRQCRRR  60
WYTYLNSDFK KGGWTPQEDM LLCEAQKIFG NRWTEIAKVV SGRTDNAVKN RFTTLCKKRA  120
KNQTISKENK SLCVNPNNKR VISQNGFFTN GTSESAAPLK KMRTQVSDVT ENCNPKGRSL  180
GECGTTENQQ LRPPFTVIRQ NSHGVGDLPA QQHVSNTTST ASNDVRKNKE QGTFIKRDDP  240
RITVLMQQAE LLSSLAAKVN AENNNQTLEN AWKELQDYLN QTHKSDLYRE DFPETDFRLE  300
DFKDLVEDLK SSTIGSRLYW RQRDLHEDSP GSSEYSTEST LQSHTAGEKT ERPQAEVCSL  360
HQGAGVEPQT VHILVDNYSG GCEDGFTGTS VAYVRPQLIR REAENGGDAG RLEGFRTGTN  420
VAQVAFLPSS KEPKDNDGLI SALSNTEFSS PIQVTPLFRT FAAAIPSPRF SESERNFLLK  480
TLGSETLSPN PSPNPSQPPP CRRSLLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-157	MYB family protein