PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13342.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 257aa MW: 28501.1 Da PI: 7.3496

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.6	1.4e-05	37	85	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd++N+ f eL l + + Ka+iL A++ +++L OVA13342.1 37 KIHKAEREKMKRDHMNELFLELGNALEPT----RQNSGKASILDDATRIVRDL 85 567889********************996....45566888999999988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MVSEVSGPMV NEVNVVADKP VGRSFPNKRN HGKIPKKIHK AEREKMKRDH MNELFLELGN 60 ALEPTRQNSG KASILDDATR IVRDLLIQVK SLKRENVALL SESHYVTVEK NELKDENAIL 120 ESQIEKLQTQ LRERTLARPG WDAAPAQLQI NNSPAQFSED HITLPVAEPT LQTPPVMGTV 180 LVIPLHHDVQ TCPELEAAQT GYKPPSNVSR PHARYPTPSD SWPSQLLGKN PKTAAEATHL 240 KNNSSSSSRD EQGSGNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	3e-50	bHLH family protein