PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13504.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 453aa MW: 50423.9 Da PI: 7.3551

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl OVA13504.1 14 KGLWSPEEDEKLLRHITRYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43.2	9.1e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l+++++ lG++ W+ Ia+ ++ gRt++++k+ w++ OVA13504.1 67 RGTFSQQEENLIIELHSVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT RYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHSVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPSTHKPLS EVETGDEKAP TTSTSNNNSE KALGGPNELD LLKAENPKPD MVVIQEPKLP 180 LAVADQFSFQ ASSSFRANSN SNNLITPTPT KEFFLERFIT SHESPNTSSG PSNSIGYFPL 240 QQLNNGSNAG LTVNSDPAPW FNQNIRPFEM NSEFNSNSIP NILPPVLSCI LTNSMDVSLP 300 SHNPSAGAGS FGLNAFQYWK AGTCSNSSSS SNGSSSSTEL QSNSSFLENG TTFSWGLVDS 360 RSDKENRNHS IQGEPEDMKW SEYLLYTPLI TAATIQNQTS QPLYSEIKSE TQFTADGSST 420 IWHQNHHHHQ QQLPASDIYA KDFQRLAAAF GQI

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT RYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEENLIIE LHSVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPSTHKPLS EVETGDEKAP TTSTSNNNSE KALGGPNELD LLKAENPKPD MVVIQEPKLP  180
LAVADQFSFQ ASSSFRANSN SNNLITPTPT KEFFLERFIT SHESPNTSSG PSNSIGYFPL  240
QQLNNGSNAG LTVNSDPAPW FNQNIRPFEM NSEFNSNSIP NILPPVLSCI LTNSMDVSLP  300
SHNPSAGAGS FGLNAFQYWK AGTCSNSSSS SNGSSSSTEL QSNSSFLENG TTFSWGLVDS  360
RSDKENRNHS IQGEPEDMKW SEYLLYTPLI TAATIQNQTS QPLYSEIKSE TQFTADGSST  420
IWHQNHHHHQ QQLPASDIYA KDFQRLAAAF GQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-102	MYB family protein