PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13512.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WRKY

Protein Properties

Length: 606aa MW: 65837.7 Da PI: 7.3171

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	331	389	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++v+++tYeg+Hnh+ OVA13512.1 331 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTVLITTYEGNHNHP 389 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MDFIHCAQPC REEHNHFCSL SRPQADKAML LREGEDVNGD VLVVAPAIIN AQVSLYSSSA 60 RLATLDDARC RVSEHKLSYS GLGNQTQKGY PPGAAAAAAA AAAFSMPVDE PLELDRLKDE 120 NQMLKSMLDQ VSKNYSALQA QLLEAMQAQA QAQAHNNNAA TNCRHHEAQI INDQRNGTSN 180 STLSVRQFMD PNPSGGAAAF DINEPSHDSD GETTTTQQQP SPPPCHPTNC TQAEAEAEAT 240 SKECHLDDMT RKRPRSSTEE DKPDHDDEND IDQIYQRWKS PKLAQQAAAS AKSSSSSVGQ 300 VPSNHHAAAA AASCRKARVS VRARSDAPLI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAV 360 GCPVRKQVQR CAEDKTVLIT TYEGNHNHPL PPQATAMANT TTAAATMLLS GSTISTASSK 420 ENYSCGLFSS PPALFPYTSS IATLSASAPF PTITLDLTTT HHGHHNQHQA TPADAMPFQR 480 PPLFPLPLHA YPPQHPQSLL RQPICANMNP HPSRLSHVVP PVQLVALAVA ISSIMGGAHS 540 RSNELNKKNS PSELHHEKTL TSSSSIINQL VHCKVLEPLK LHNHLYREHP KKVNLEIDKP 600 NVFTEG

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MDFIHCAQPC REEHNHFCSL SRPQADKAML LREGEDVNGD VLVVAPAIIN AQVSLYSSSA  60
RLATLDDARC RVSEHKLSYS GLGNQTQKGY PPGAAAAAAA AAAFSMPVDE PLELDRLKDE  120
NQMLKSMLDQ VSKNYSALQA QLLEAMQAQA QAQAHNNNAA TNCRHHEAQI INDQRNGTSN  180
STLSVRQFMD PNPSGGAAAF DINEPSHDSD GETTTTQQQP SPPPCHPTNC TQAEAEAEAT  240
SKECHLDDMT RKRPRSSTEE DKPDHDDEND IDQIYQRWKS PKLAQQAAAS AKSSSSSVGQ  300
VPSNHHAAAA AASCRKARVS VRARSDAPLI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAV  360
GCPVRKQVQR CAEDKTVLIT TYEGNHNHPL PPQATAMANT TTAAATMLLS GSTISTASSK  420
ENYSCGLFSS PPALFPYTSS IATLSASAPF PTITLDLTTT HHGHHNQHQA TPADAMPFQR  480
PPLFPLPLHA YPPQHPQSLL RQPICANMNP HPSRLSHVVP PVQLVALAVA ISSIMGGAHS  540
RSNELNKKNS PSELHHEKTL TSSSSIINQL VHCKVLEPLK LHNHLYREHP KKVNLEIDKP  600
NVFTEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	2e-50	WRKY family protein