PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13625.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Trihelix
Protein Properties Length: 280aa    MW: 31570.8 Da    PI: 10.0982
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.13e-1526117187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 +W+++   +Liea  e+  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +k++  +   + +s++p+++ql+a
  OVA13625.1  26 CWSEEASYTLIEAWGERYLELNRGNLRQKHWQEVADAVnarhgAVKKARRTDVQCKNRIDTLKKKYKLEKARILSSGGTLKSSWPFYSQLDA 117
                 7*************************************987776777899******************999877765555669*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDGEETLNTP VSTRPSHTGL PIREDCWSEE ASYTLIEAWG ERYLELNRGN LRQKHWQEVA  60
DAVNARHGAV KKARRTDVQC KNRIDTLKKK YKLEKARILS SGGTLKSSWP FYSQLDALIG  120
TSVQSKKIPP PLAISLPYRK TPPALPHALV VPVAARSVRE KRSSPAVDDS FFRRNYSAVA  180
AAAAADAADS DSSRSSTESR RKDGEVDGFR ELAQAISRFA DIYERVEGAK QRQMIELEKE  240
RMEFMKSLEF QRMQLFMDSQ VQIEKIKRAK RAAASGDNIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.16e-54Trihelix family protein