PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13818.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 382aa MW: 44212.2 Da PI: 7.756

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.8	1e-06	64	85	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ + +Lk+H+++H OVA13818.1 64 TCEECGASFRKPAYLKQHMQSH 85 6*******************99 PP
2	zf-C2H2	17.9	8.6e-06	91	115	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dC+ s++rk++L+rH+ H OVA13818.1 91 FICPidDCHSSYRRKDHLTRHLLQH 115 78*******************9887 PP
3	zf-C2H2	12.7	0.00039	120	145	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp +C+ +F k n+krH H OVA13818.1 120 FSCPveNCNHRFAYKGNMKRHVEElH 145 89*******************98777 PP
4	zf-C2H2	15.4	5.2e-05	161	185	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ Cgk F+ s L++H +H OVA13818.1 161 HICQeiGCGKAFNFASKLRKHEESH 185 679999***************9988 PP
5	zf-C2H2	19.3	3e-06	264	288	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C ++F++ksnL++Hi++ H OVA13818.1 264 KCSfeGCLYTFTTKSNLNQHIKSvH 288 688889****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MEMEGEGKKV PIFRDIRRYY CEFCGICRVL NGCICSLFNT HPYEEMEEKS IDASEEKEES 60 KSNTCEECGA SFRKPAYLKQ HMQSHSLERP FICPIDDCHS SYRRKDHLTR HLLQHQGKLF 120 SCPVENCNHR FAYKGNMKRH VEELHDDEGS SSCDSEGQKQ HICQEIGCGK AFNFASKLRK 180 HEESHGKFLL CSISLNNFKL DSVEAICCEP DCMKHFTNVE CLKAHIQSCH QHVLCEICGT 240 KQLKKNIKRH MRIHENGGAS ERIKCSFEGC LYTFTTKSNL NQHIKSVHLE LRPFACRVPE 300 CGKKFPFKHV RDNHEKSGCH VYIHGDFEEA DEQFRSRPRG GRKRTYPTVE TLLRKRVVPP 360 SQTDSILSQG SEYLAWLLNS ED

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MEMEGEGKKV PIFRDIRRYY CEFCGICRVL NGCICSLFNT HPYEEMEEKS IDASEEKEES  60
KSNTCEECGA SFRKPAYLKQ HMQSHSLERP FICPIDDCHS SYRRKDHLTR HLLQHQGKLF  120
SCPVENCNHR FAYKGNMKRH VEELHDDEGS SSCDSEGQKQ HICQEIGCGK AFNFASKLRK  180
HEESHGKFLL CSISLNNFKL DSVEAICCEP DCMKHFTNVE CLKAHIQSCH QHVLCEICGT  240
KQLKKNIKRH MRIHENGGAS ERIKCSFEGC LYTFTTKSNL NQHIKSVHLE LRPFACRVPE  300
CGKKFPFKHV RDNHEKSGCH VYIHGDFEEA DEQFRSRPRG GRKRTYPTVE TLLRKRVVPP  360
SQTDSILSQG SEYLAWLLNS ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-102	C2H2 family protein