PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13873.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 252aa    MW: 28573.7 Da    PI: 4.6027
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.93.1e-14953145
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                k+ien   r+v fskRr+gi+K Ae LS LC+ ++  i fs+ g+
  OVA13873.1  9 KKIENLQARNVCFSKRRKGIIKQAEKLSKLCNLDIHFITFSPAGE 53
                68****************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MGRRELEMKK IENLQARNVC FSKRRKGIIK QAEKLSKLCN LDIHFITFSP AGEPYVSSTS  60
CGNSSSSSAS FDSVIQNYLN DAISDSDLHK TEFQPQIPDV KNDHDLLSLN EVKQSWMDVD  120
VTKLSLSQIQ SYKRYLEKLK SEVAHALEKK TVFEDNNGEG EGSFMVKDEL PLPMISTDDS  180
ISSDQSVYKG AIDEIDDQMH LFSENEHQMI NANTTTDQAY KGDGDKIDHD KMLFRSNDKH  240
FDDIDEVVAS FE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.12e-14M-type_MADS family protein