PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13887.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 939aa MW: 103604 Da PI: 7.2995

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59	8.5e-19	357	457	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++lv++ OVA13887.1 357 FEKMLSASDAGRIGRLVLPKKCAEAYfpTISSPEGLPLRVQDAKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRID-PEGKLVMG 453 89************************555556667***********99899999999.*******************987.77778877 PP EE-S CS B3 96 vfrk 99 ++++ OVA13887.1 454 FRKA 457 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 939 aa Download sequence
MSSSTKICFN PDCKDVKSER FRKGWRLRTG DSAELCERCA SAYEEGRFCD IFHTDAAGWR 60 SCESCGKRVH CGCIVSVHAF VLLDAGGVDC MGCARKNIMM ASNQMWSSSF VLPLPERLKD 120 LSVKNWNSSA GTSAVAGQWH QRHNIWNTTA AQSELHSRIP FEVKSEKLIS GEHSSSSSLE 180 KKKLEDPSER VISSSLNLAA LDRLGNGNAG IESITAFHTF HREEGYLDGL QGMTFEAHPN 240 SCANVSLQSS TSKDDPCTPH FGLTLPYSPN EANGPNRVSG TQSQRQPLPP PPPMVKQFYA 300 NLHNGVESST ETQIRNGRPR GDARARNQLH SRYWPRITDQ ELQQISGDSN SVITPLFEKM 360 LSASDAGRIG RLVLPKKCAE AYFPTISSPE GLPLRVQDAK GKEWVFQFRF WPNNNSRMYV 420 LEGVTPCIQS MQLQAGDIVT FSRIDPEGKL VMGFRKASSV PPSDQDNQTH KVGNGVSKNA 480 EVNTRKSKPS EVVSTPRPLK GSAESTSFSS INQVNSADPA SAWAKVDKSG YIAKEMHGSK 540 SSILPSKRKS STLGSKSKRL RIENEDLIEL KLTWEEAQGL LRPPRNHVPS VVVIEGHEFE 600 EYEEAPILGR PTIFTTNNVG EKIQWAQCED CSKWRKLPVD ALLPPRWTCS DNSWDPKRSS 660 CSSAEELTME QLEDMLSSSN TDASKKVKAT KKDRDSLETS DGLDPLANLA NLAILEESET 720 LPPSTQQTTT RHPRHRPGCT CIVCIQPPSG KGPKHKDTCT CNVCLTVRRR FRTLMERREK 780 RQSEKEAETA RKKQQQFQEK LENEDDQLLM NSSNTNNSAP NPRMVNESAD DDGNGKKMSS 840 SPFKGGIDLN IQPEREDEPS PVSDSGGMTR CMSHGQPQML ASSDGHIELV VNQIEHRGGG 900 AGGENLQNGV SYASGDHLDA NMDHHPVTTL LPVSTSATG

Sequence ? help Back to Top

Protein Sequence Length: 939 aa Download sequence

MSSSTKICFN PDCKDVKSER FRKGWRLRTG DSAELCERCA SAYEEGRFCD IFHTDAAGWR  60
SCESCGKRVH CGCIVSVHAF VLLDAGGVDC MGCARKNIMM ASNQMWSSSF VLPLPERLKD  120
LSVKNWNSSA GTSAVAGQWH QRHNIWNTTA AQSELHSRIP FEVKSEKLIS GEHSSSSSLE  180
KKKLEDPSER VISSSLNLAA LDRLGNGNAG IESITAFHTF HREEGYLDGL QGMTFEAHPN  240
SCANVSLQSS TSKDDPCTPH FGLTLPYSPN EANGPNRVSG TQSQRQPLPP PPPMVKQFYA  300
NLHNGVESST ETQIRNGRPR GDARARNQLH SRYWPRITDQ ELQQISGDSN SVITPLFEKM  360
LSASDAGRIG RLVLPKKCAE AYFPTISSPE GLPLRVQDAK GKEWVFQFRF WPNNNSRMYV  420
LEGVTPCIQS MQLQAGDIVT FSRIDPEGKL VMGFRKASSV PPSDQDNQTH KVGNGVSKNA  480
EVNTRKSKPS EVVSTPRPLK GSAESTSFSS INQVNSADPA SAWAKVDKSG YIAKEMHGSK  540
SSILPSKRKS STLGSKSKRL RIENEDLIEL KLTWEEAQGL LRPPRNHVPS VVVIEGHEFE  600
EYEEAPILGR PTIFTTNNVG EKIQWAQCED CSKWRKLPVD ALLPPRWTCS DNSWDPKRSS  660
CSSAEELTME QLEDMLSSSN TDASKKVKAT KKDRDSLETS DGLDPLANLA NLAILEESET  720
LPPSTQQTTT RHPRHRPGCT CIVCIQPPSG KGPKHKDTCT CNVCLTVRRR FRTLMERREK  780
RQSEKEAETA RKKQQQFQEK LENEDDQLLM NSSNTNNSAP NPRMVNESAD DDGNGKKMSS  840
SPFKGGIDLN IQPEREDEPS PVSDSGGMTR CMSHGQPQML ASSDGHIELV VNQIEHRGGG  900
AGGENLQNGV SYASGDHLDA NMDHHPVTTL LPVSTSATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-140	B3 family protein