PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13923.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 217aa    MW: 23668 Da    PI: 8.173
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.52.6e-39131141101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l ++k
  OVA13923.1  13 PCGACKFLRRKCASDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQAK 111
                 7*************************99*******************************************************************9999 PP

      DUF260  99 eel 101
                 ++l
  OVA13923.1 112 AQL 114
                 875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSTTGTGSGS GSPCGACKFL RRKCASDCIF APYFCSEQGP ARFAAIHKVF GASNVSKLLL  60
HVPVPDRCEA VVTIAYEAQA RIRDPVYGCV AHIFALQQQV ACLQAQLMQA KAQLVNNVID  120
SRSLVNHNWM AGNVAVAGAG APQHLTYPTY MQQHSVSPQS SLDSVDNSND ISMHHEVHAR  180
PDNNDHLHLF QPCNKKRLIS NNDLGELQAL ALRMMRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-60LBD family protein