PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13924.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 232aa    MW: 25753.7 Da    PI: 5.8554
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.98.2e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf +eq +  f ++hk+FGasnv+kll++lp  +r++a+ ++ yeA+ar+rdPvyG+v++i++lqqq+ +l+a+l +lk
  OVA13924.1   7 PCGACKFLRRKCVNGCVFAPYFSHEQgATVFSAIHKVFGASNVSKLLTHLPVRDRSEAAVTISYEAQARLRDPVYGCVSHIFALQQQVVSLQAQLTSLK 105
                 7*************************8899*****************************************************************9998 PP

      DUF260  99 ee 100
                 ++
  OVA13924.1 106 AQ 107
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MTGFGSPCGA CKFLRRKCVN GCVFAPYFSH EQGATVFSAI HKVFGASNVS KLLTHLPVRD  60
RSEAAVTISY EAQARLRDPV YGCVSHIFAL QQQVVSLQAQ LTSLKAQATQ NLVNGSTSSS  120
SQEDNFYGKL PCYNSSSASQ DIQDLFHLQE SRMAQQFNRI LPTSDAETML YYENGIMDQN  180
PMGENGSFTS FEEYSSHNVM GASSDDIQTD TRKWAFQNMD DLQSMAFAYV QH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.12e-54LBD family protein