PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA13950.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 227aa    MW: 25754.7 Da    PI: 4.868
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA13950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.6e-099322347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                     +W+ Ia++++ gRt++++k++w+++
       OVA13950.1  9 RWAHIASHLP-GRTDNEIKNYWNSW 32
                     6*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MARNRRIYRW AHIASHLPGR TDNEIKNYWN SWIKKKIRKP PSAPRPVPVS TTPNNNTDQL  60
LQSTYNQVNL VNQEFSSKQP TVLLQETMSS STTSCPLFMF DPDLNVDGIG FAQQEEHFVD  120
TVGLNSSESY WHSNQHQIQS LPPPPMFTDD VRMNSNDGGE IRMLEYLQGQ NDMFFMNEWV  180
DHEPQQCPAA GFLMWEHFEA GQLGGEAIAE AASSNMGTIL SSYPSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.13e-18MYB family protein