PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA14078.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YC
Protein Properties Length: 115aa    MW: 12771.9 Da    PI: 9.7052
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA14078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC118.53e-37211031899
       NF-YC  18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                  h+lPlarikki+k + +dvkmis eaP+l+skacelfi e+t+rsw+++ + krrtl+k d+a av +tdifdflvd+v  +
  OVA14078.1  21 PHSLPLARIKKIMKkSGDDVKMISGEAPILFSKACELFIEEITVRSWMKTLQGKRRTLHKEDVARAVIETDIFDFLVDVVSDS 103
                 599**********825689************************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MRQPGIYSEM LSGGISGKTG PHSLPLARIK KIMKKSGDDV KMISGEAPIL FSKACELFIE  60
EITVRSWMKT LQGKRRTLHK EDVARAVIET DIFDFLVDVV SDSKISCDKI RATSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.24e-35NF-YC family protein