PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA14082.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB
Protein Properties Length: 319aa    MW: 36013.1 Da    PI: 6.932
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA14082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.7e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEde+lvd++++ G g+W++ ++  g+ R++k+c++rw +yl
       OVA14082.1 14 RGPWTPEEDEILVDYIRKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding51.13e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE++ +++++  +G++ W++Ia+ ++ gRt++++k++w+++l
       OVA14082.1  67 RGPFTLEEEKTIIQLHGIMGNR-WASIAAQLP-GRTDNEIKNFWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGRAPCCDKQ GLKRGPWTPE EDEILVDYIR KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGPF TLEEEKTIIQ LHGIMGNRWA SIAAQLPGRT DNEIKNFWNT HLKKRFRSLG  120
INPHTHTSPS SPASSPMQKS STSPSTRHMT QWESARLEAE ARLSRESYRF GSSQSDLPTS  180
GKPDSDYFLR MWNSEVGESF RRFQVRETSL ITCQSPYSQA SSSTKLGLTS GMINTEVKKE  240
SDQHEEIDFR SCRSDAEDVM AGSDSSSSNE LDDSSDLSLQ LLLDFPSNCD EEMNFFQGHL  300
GNFSLFPNVL TENSLNSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-104MYB family protein