PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA14300.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26684.2 Da    PI: 9.2711
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA14300.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.11.8e-31958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+
  OVA14300.1  9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 58
                79***********************************************8 PP
2K-box118.46.1e-39781736100
       K-box   6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 +++ ++ea+++ +qqe++kL+++i  Lq+++Rhl+Ge L+s+s+keL+qLe +Lek++++iRskKnell+++ie++qk+e +lq++n++Lr+k++e
  OVA14300.1  78 NSQcASEANTQFYQQEASKLRQQIGILQNSNRHLMGEALSSMSVKELKQLEGRLEKGISRIRSKKNELLFSEIEYMQKREIDLQNDNMYLRAKIAE 173
                 4446899**************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSN RGRLYEYANN  60
SVKSTIDRYK KTCQDPSNSQ CASEANTQFY QQEASKLRQQ IGILQNSNRH LMGEALSSMS  120
VKELKQLEGR LEKGISRIRS KKNELLFSEI EYMQKREIDL QNDNMYLRAK IAENERAQQH  180
MNLMPGNEYD VMTSSAYDSR NFLQVNLLES SNHHYSRQEQ TALQLGASPV E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-115MIKC_MADS family protein