PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA14479.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 228aa    MW: 25133.2 Da    PI: 9.1752
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA14479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260103.81.4e-3218110192
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                 aCa+Ck++r+kCa dCvl   fpa+++++f++vh++FG+sn++kllk+l+++e r++a++slv+eA++r+rdPv+G++g +lk+ ++l+ l+ 
  OVA14479.1  18 ACASCKHQRKKCAVDCVLHDFFPASKNADFQAVHRVFGVSNITKLLKSLRTSEeRQKAIDSLVWEAQCRQRDPVSGSYGEFLKVFEELKLLRG 110
                 7************************************************66655****************************99999987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MENKDGTAAA ITTGARQACA SCKHQRKKCA VDCVLHDFFP ASKNADFQAV HRVFGVSNIT  60
KLLKSLRTSE ERQKAIDSLV WEAQCRQRDP VSGSYGEFLK VFEELKLLRG HVQLHGIVTN  120
QTGPKTRTNN KTLLIGWNGN NGVVGGGGGG GGGFDYNNNI NSYMQNNGSF IEEPVQFGFG  180
SLVQAEQEKR YQGRDGVAIS VPNLLNQHEQ YFYHPGNYAQ NPKLLTKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.13e-31LBD family protein