PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA14567.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 354aa MW: 39994 Da PI: 7.1411

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA14567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.9e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++q+G+g +W + ++++g++R++k+c++rw++yl OVA14567.1 14 KGPWSPEEDTKLKNYIEQYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36.9	8.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eE+ ++ + G++ W+ Ia+ ++ gRt++++k++w++ OVA14567.1 69 GGFSEEEENIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDTKLKNYIE QYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEENIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQARKL GSLKQEMKRV MSGSFNMVTD HQNRITSTDH YNQFYLPTDH CQPPMPPGSM 180 PPPPYPNQDL SLINDHDPIR KLLIKLGGRF CEDDNQQPND GGSNTNLQCS LNNISPTQEQ 240 FYENSMNLVS SQLMNDDHQY GIDGTNNMHM LQGLNNFPVE AVYNNSQRLE GMECFYEVGM 300 GNGSTGASSI ESNSWVDMAS LVYPPTVTTN YEGCHQQGGM LQECAFVDSS YLRG

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDTKLKNYIE QYGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEENIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQARKL GSLKQEMKRV MSGSFNMVTD HQNRITSTDH YNQFYLPTDH CQPPMPPGSM  180
PPPPYPNQDL SLINDHDPIR KLLIKLGGRF CEDDNQQPND GGSNTNLQCS LNNISPTQEQ  240
FYENSMNLVS SQLMNDDHQY GIDGTNNMHM LQGLNNFPVE AVYNNSQRLE GMECFYEVGM  300
GNGSTGASSI ESNSWVDMAS LVYPPTVTTN YEGCHQQGGM LQECAFVDSS YLRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-77	MYB family protein