PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA14578.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 247aa    MW: 28640.4 Da    PI: 9.7779
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA14578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.89.2e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  OVA14578.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
                79***********************************************96 PP
2K-box107.81.2e-358317310100
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 +e ++ +++ e++kLk++ie Lq++qRh++GedLes+slkeLq+LeqqL+++lk+iRs+Kn+l++e+i +lq+kek+lqe+n++L kkl+e
  OVA14578.1  83 SELDQGNWSLEYTKLKAKIEILQKNQRHFMGEDLESMSLKELQNLEQQLDTALKQIRSRKNQLMYESIADLQRKEKALQEQNNQLGKKLKE 173
                 6677899*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD  60
SGMERILERY ERYSYAEREL VASELDQGNW SLEYTKLKAK IEILQKNQRH FMGEDLESMS  120
LKELQNLEQQ LDTALKQIRS RKNQLMYESI ADLQRKEKAL QEQNNQLGKK LKEKEKEVAQ  180
QQTQWDQQNQ GQSSPSFLLS QSLPSLNIGG SYQVRGSNGS EEEGTQPQTT RTNTTLMPPW  240
MIRHVNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.12e-86MIKC_MADS family protein