PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15005.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YB
Protein Properties Length: 159aa    MW: 17450.6 Da    PI: 8.463
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB172.64.3e-5411106297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqdr+lPianv+rimk++lPanak+sk+a+et+qecvsefisfvt easdkc++ekrkt+ngdd+++a++tlGf+dyv plk yl+kyrelegek
  OVA15005.1  11 KEQDRLLPIANVGRIMKQILPANAKVSKEARETMQECVSEFISFVTVEASDKCHKEKRKTVNGDDICFAMGTLGFDDYVVPLKRYLHKYRELEGEK 106
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MSSGSGGDGI KEQDRLLPIA NVGRIMKQIL PANAKVSKEA RETMQECVSE FISFVTVEAS  60
DKCHKEKRKT VNGDDICFAM GTLGFDDYVV PLKRYLHKYR ELEGEKANQS KGTSNYNGED  120
DKDESSSIFR SGRPNSVPTP LKFNIIAGGK GDGSNSRPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-61NF-YB family protein