PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15066.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CO-like

Protein Properties

Length: 416aa MW: 46394.7 Da PI: 6.4021

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22	3.4e-07	49	91	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 ++r C+ ++e ++ l+C+ ++ lC C e H+ Ht OVA15066.1 49 QKRLCDFCGESKALLYCRADSAKLCFHCDREVHSTnplftkHT 91 7899****99*******************6677777777 PP
2	zf-B_box	23.2	1.4e-07	94	137	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 + C+++++++++++C + ++ lC++C e+H + H+++p OVA15066.1 94 QLCDLCDSNPASIHCSTENHVLCQNCDWESH-RlsssssvHDRRP 137 68*****************************.5577888888776 PP
3	CCT	64.2	3.8e-22	372	415	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ ++RYkeKrktR+F+K+irYesRKa+AesR R+KGrF+k + OVA15066.1 372 RDSMISRYKEKRKTRRFDKHIRYESRKARAESRTRIKGRFAKVS 415 77889************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MGRRGRPTLV WTTSWLISKP HIHSQSPNKE EREGNVEQEE NIKTQPQQQK RLCDFCGESK 60 ALLYCRADSA KLCFHCDREV HSTNPLFTKH TRFQLCDLCD SNPASIHCST ENHVLCQNCD 120 WESHRLSSSS SVHDRRPLEG FTGCPSAIEL SSILGFEDLG DKSLLDGGGG GNGCLLGSET 180 NGFSDLFVWE TPSIFSLDDL IVSSDSSQNF PAMGIPPLPK NRNTACGKYK EDIIHQLHNM 240 LNLETCWNND FVNVESLLGL KPLVPEQCLQ PGNVGIVPEH EADPNILPSY EANTIHWQGD 300 GGEAANQNLS SSTFSGSYFE ESFLVLDKPD DVGGSASDAN GGHEKQSQHP IIPDTLQVVP 360 KVAPRELTGQ NRDSMISRYK EKRKTRRFDK HIRYESRKAR AESRTRIKGR FAKVSN

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MGRRGRPTLV WTTSWLISKP HIHSQSPNKE EREGNVEQEE NIKTQPQQQK RLCDFCGESK  60
ALLYCRADSA KLCFHCDREV HSTNPLFTKH TRFQLCDLCD SNPASIHCST ENHVLCQNCD  120
WESHRLSSSS SVHDRRPLEG FTGCPSAIEL SSILGFEDLG DKSLLDGGGG GNGCLLGSET  180
NGFSDLFVWE TPSIFSLDDL IVSSDSSQNF PAMGIPPLPK NRNTACGKYK EDIIHQLHNM  240
LNLETCWNND FVNVESLLGL KPLVPEQCLQ PGNVGIVPEH EADPNILPSY EANTIHWQGD  300
GGEAANQNLS SSTFSGSYFE ESFLVLDKPD DVGGSASDAN GGHEKQSQHP IIPDTLQVVP  360
KVAPRELTGQ NRDSMISRYK EKRKTRRFDK HIRYESRKAR AESRTRIKGR FAKVSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	2e-69	CO-like family protein