PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15241.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MIKC_MADS

Protein Properties

Length: 240aa MW: 27569.4 Da PI: 10.1351

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87	1e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev +iifsstgkly++ss OVA15241.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLIIFSSTGKLYDFSS 59 8***********************************************96 PP
2	K-box	86.7	4.7e-29	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ + +q+e+a L+ +++nLq+++R+l+Ge+L+ Ls k+Lq+Le+qLe sl+ +R++K+++l+++i+el +k + l++en++L kk+ OVA15241.1 81 NATSEVKFWQREAASLRHQLQNLQETHRQLMGEELSGLSTKDLQNLENQLEMSLRGVRTQKDQILTDEIQELNRKGNLLHHENMELYKKV 170 678899*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MGRGKIVIRR IDNTTSRQVT FSKRRNGLLK KAKELAILCD AEVGLIIFSS TGKLYDFSST 60 SMKSVIERYN KSKEDHHQLM NATSEVKFWQ REAASLRHQL QNLQETHRQL MGEELSGLST 120 KDLQNLENQL EMSLRGVRTQ KDQILTDEIQ ELNRKGNLLH HENMELYKKV NLIRQENADL 180 YKKVNGTRDA TGATKNSHLP TGFSIAEDLH PPIHLQLSQP QQQNYEIPAR ATKLGRLQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-104	MIKC_MADS family protein