PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15318.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 264aa    MW: 30028.1 Da    PI: 9.5154
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.61.1e-1037662049
                HHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyey 49
                ++KKA+EL++LC+ae  vi+fs+  k y +
  OVA15318.1 37 LFKKASELCTLCAAETDVIVFSPARKSYSF 66
                8**********************9988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGSCKMDKYD HARVEKLSNL EESRISKKHG EARIIYLFKK ASELCTLCAA ETDVIVFSPA  60
RKSYSFGHPS VDTIVDRYLS GGNYASQNVG GVHPNGRARV RDLNRQYTEA LNKLEAEKKR  120
GMELKKVRRD NRNQHWWKKP IEELGLQELE LLKDAMDELK DNVADGANKL LIKDSHFMPT  180
ADPIGTSSSS QHGYPSEPNP NHLLASVVPN CNAPYPKYKG HYHQSTTRLK SGRVSPVNWT  240
FRHLIDTVHI KFYVVEANLN KDMH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.14e-31M-type_MADS family protein