PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15319.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 143aa    MW: 15938.1 Da    PI: 10.1503
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15319.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.84.3e-211765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                krie +  rqvtfskRr  ++KKA+EL++LC+ae  vi+fs+ gk y +
  OVA15319.1 17 KRIEKEDARQVTFSKRRVCLFKKASELCTLCAAETDVIVFSPAGKPYSF 65
                79******************************************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MSSKRKLSKG RRKIEIKRIE KEDARQVTFS KRRVCLFKKA SELCTLCAAE TDVIVFSPAG  60
KPYSFGHPSV DTVVDHYLSG GNYASQNSIG GVHPHVGARI RDLNRQYTEA LNELDAEKKR  120
GMESEKEGKT LETNTGGKNP LKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.15e-31M-type_MADS family protein