PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15321.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 232aa    MW: 26172.8 Da    PI: 9.3275
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.12.4e-231765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                krie +  rqvtfskRr g++KKA+EL++LC+ae avi+fs+tgk y +
  OVA15321.1 17 KRIEKEDARQVTFSKRRVGLFKKASELCTLCAAETAVIVFSPTGKPYSF 65
                79*******************************************8887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MSSKRKLSKG RRKNEIKRIE KEDARQVTFS KRRVGLFKKA SELCTLCAAE TAVIVFSPTG  60
KPYSFGHPSV DTVVDRYLSG GNYASQNNIG GVHAHVGARI RDLNREYTEA LNELDAEKKR  120
GMELEKVRRN SRNQHWWEKP IEELGLQELE LLKAALDEVK KIVAEHRADE LLIDSSHFMP  180
FLPIMNPIGM SSTTPNGYPF EPNPNPNPNH LHTSILPHHD YGFGFGFGLP GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-39M-type_MADS family protein