PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15415.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 545aa MW: 58256.8 Da PI: 5.8832

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.7e-09	360	408	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq OVA15415.1 360 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 408 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MDLGDKDKFG LEKRSGDPLN YQSPNMPSDW QFGTANLGNQ SLGLAPTDNS TNKGDLIMGS 60 SACSSVSMVD SFAPTLWGHP GSQNLSLCDS SVQKGVPGSS GTGIGNLGWN PTNSVSKRGV 120 FLPPGMLHQS LSQFPADSAF IERAARFSCF NGGSFSDMVN PFNISESLNP YSKSGGAIQG 180 PSDVLFNGLK PLPCSQSQMN EPNTGEVAKD VSVSVDRGTT DGSPMKNEVK VGNFVRTPDE 240 AKQGIGISSN ESDDAEFSGR GGQEDSCMLE NAGREPSSSK GLGPKKRKRG GQDSELDQGK 300 GAPQVTGEAP NDNSDSKQKD DQNPSSTAKS NKHGKDNSQA SDAPKEDYIH VRARRGQATN 360 SHSLAERVRR EKISERMKFL QDLVPGCSKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAA 420 VNPRLDLNIE GLLAKDILQS RVGPSSTMGF SPDMSMAHPQ VHPSQPGLIQ PGIPGMGNPS 480 DALRRTINSQ LMAMNAGYKD PNTQMPNVWD DELHNVIQMS FGANVPFNGQ DLNGSLPPGH 540 MKVEL

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MDLGDKDKFG LEKRSGDPLN YQSPNMPSDW QFGTANLGNQ SLGLAPTDNS TNKGDLIMGS  60
SACSSVSMVD SFAPTLWGHP GSQNLSLCDS SVQKGVPGSS GTGIGNLGWN PTNSVSKRGV  120
FLPPGMLHQS LSQFPADSAF IERAARFSCF NGGSFSDMVN PFNISESLNP YSKSGGAIQG  180
PSDVLFNGLK PLPCSQSQMN EPNTGEVAKD VSVSVDRGTT DGSPMKNEVK VGNFVRTPDE  240
AKQGIGISSN ESDDAEFSGR GGQEDSCMLE NAGREPSSSK GLGPKKRKRG GQDSELDQGK  300
GAPQVTGEAP NDNSDSKQKD DQNPSSTAKS NKHGKDNSQA SDAPKEDYIH VRARRGQATN  360
SHSLAERVRR EKISERMKFL QDLVPGCSKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAA  420
VNPRLDLNIE GLLAKDILQS RVGPSSTMGF SPDMSMAHPQ VHPSQPGLIQ PGIPGMGNPS  480
DALRRTINSQ LMAMNAGYKD PNTQMPNVWD DELHNVIQMS FGANVPFNGQ DLNGSLPPGH  540
MKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-115	bHLH family protein