PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15444.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family B3
Protein Properties Length: 313aa    MW: 34926.9 Da    PI: 9.9038
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.41.5e-14202286898
                 -HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 s+v     l +p++f ++h   k   ++ ++l+d+sgr W v +i rk +g+  l++GW   v  n++++ D+++F+l+  +  e  +++fr
  OVA15444.1 202 SHVYLGFFLAMPNSFRKSHlP-K--DNQRMILRDPSGRAWPVSYIGRKDKGA--LSGGWGTVVYHNNIEADDVCIFELITAN--EIQLHIFR 286
                 56666677999*****99942.3..3447***************66666665..9**********************99644..44677766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEGETSGTSS LMGPSGKVWN FTVNIYDPSE CEKESAYNAV CSQDTTCSIR DKGKKRGISG  60
EAVKVLNDSS YKTCEGLSKR KRGMEATVPS VSLHSAHKFT SSMNKCEKNQ LEVHSNRLAV  120
SKAANLEDSV NGNRRTLKYK LKKVSEKHHL DSATKHLLND NRCRALISQR RNVTEGELER  180
AIEAAMAFES KNPYTVMVMR VSHVYLGFFL AMPNSFRKSH LPKDNQRMIL RDPSGRAWPV  240
SYIGRKDKGA LSGGWGTVVY HNNIEADDVC IFELITANEI QLHIFRVVEE ITPLIKNTSR  300
LKKPLGFGGK LGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-18B3 family protein