PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15537.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 524aa MW: 60056.3 Da PI: 8.718

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.9	3.3e-29	375	460	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++ev Li++r ++ ++ + ++ k plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+++kkr s +s+tcpyf+ql+ OVA15537.1 375 RWPRDEVYSLINLRCNLCSSGDDkESTKVPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDTNKKR-SLDSKTCPYFHQLN 460 8******************9735799***************************************8.999*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MSLHHPSPAS LMSHNSLIKY SNLIFFINCI DNHQHIYMIT KKKKIIKKGK LAELGYKRSA 60 EKCKEKFEEM NQLYCNDSTS NYSKNYRSFS ELEALFEDKN PKTTSADEKM QVRTTDGGDQ 120 NKMGLNLEQE NSGNETCLEN PYVENQSMVK KQHRRKRKRY HKLELLKGLC EEIVNKIMVQ 180 QEELHKKLLQ DMERKEEERV AREEAWKKKE MDRINKEIEI RAQEQAIACD RETTIIEFLK 240 KFTSSNNPSQ YQDLALKTDQ DTTKTLPQNP NPPSSPSIFR SENSNSLSRV PTQNNPKLPT 300 SSTVPTATKK PVSCTTQNNA KVPNSSHLDL ACQNPSSLTT TQNNPDVTSS SSTTPLTVPQ 360 NPSSSSNDRE ENGKRWPRDE VYSLINLRCN LCSSGDDKES TKVPLWERIS QGMLELGYKR 420 SAKKCKEKWE NINKYFRKTK DTNKKRSLDS KTCPYFHQLN SLYNQGRLIL PSEGPENHSA 480 GSTENHPESP ETRVSGGFSD QAMVHANEGE RNNIIQVSPL EFEY

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MSLHHPSPAS LMSHNSLIKY SNLIFFINCI DNHQHIYMIT KKKKIIKKGK LAELGYKRSA  60
EKCKEKFEEM NQLYCNDSTS NYSKNYRSFS ELEALFEDKN PKTTSADEKM QVRTTDGGDQ  120
NKMGLNLEQE NSGNETCLEN PYVENQSMVK KQHRRKRKRY HKLELLKGLC EEIVNKIMVQ  180
QEELHKKLLQ DMERKEEERV AREEAWKKKE MDRINKEIEI RAQEQAIACD RETTIIEFLK  240
KFTSSNNPSQ YQDLALKTDQ DTTKTLPQNP NPPSSPSIFR SENSNSLSRV PTQNNPKLPT  300
SSTVPTATKK PVSCTTQNNA KVPNSSHLDL ACQNPSSLTT TQNNPDVTSS SSTTPLTVPQ  360
NPSSSSNDRE ENGKRWPRDE VYSLINLRCN LCSSGDDKES TKVPLWERIS QGMLELGYKR  420
SAKKCKEKWE NINKYFRKTK DTNKKRSLDS KTCPYFHQLN SLYNQGRLIL PSEGPENHSA  480
GSTENHPESP ETRVSGGFSD QAMVHANEGE RNNIIQVSPL EFEY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	159	RRKRKR
2	419	427	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	7e-65	Trihelix family protein