PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15589.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 246aa    MW: 27383.6 Da    PI: 4.8821
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260121.25.6e-387106199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf+ +q +++fa+vhk+FGasnv+kll+++p ++r++a+ s+ yeA ar+++P yG+v+ i++lqqq++ l++e+++l+
  OVA15589.1   7 SCGACKFLRRKCNNGCVFAPYFCYDQaAAHFAAVHKVFGASNVSKLLSNVPVHNRSEAAVSISYEALARMHNPTYGCVAQIFALQQQVAILQEEIEQLE 105
                 6************************978*******************************************************************9887 PP

      DUF260  99 e 99 
                 +
  OVA15589.1 106 T 106
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGGHGSSCGA CKFLRRKCNN GCVFAPYFCY DQAAAHFAAV HKVFGASNVS KLLSNVPVHN  60
RSEAAVSISY EALARMHNPT YGCVAQIFAL QQQVAILQEE IEQLETQGGP HRATHDVINR  120
PSSQSMNDNS TLFRFSSSQL NDLNLHDYCN QQVHDPSNVM MNLNGNIMAL NKDTNLEIPE  180
QHIWGNHLFS EDYTNEINSL EMRQLPIIGT TEQEIYPWLD DAAGMQSSTQ LINPSLLDDL  240
LGEIDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.11e-32LBD family protein