PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA15865.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 235aa    MW: 26197.1 Da    PI: 9.9741
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA15865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind28.34.9e-0913674498
   GAGA_bind 44 lalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvg 98
                lalsekkaa+ae+dma  q+++ ++ern a +e+dn+l+al+++ ns+++++  +
  OVA15865.1 13 LALSEKKAALAEQDMAIRQQEQTISERNSAKMEQDNALAALEYRGNSTVNSTHYN 67
                5899******************************************988655433 PP
2GAGA_bind1581.6e-4865208123270
   GAGA_bind 123 avelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad..erskaekksidlvlngvslDestlPvPvCsCtGal 219
                  ++ re++++ea pi+     ++e++k+   +r++++ke+k  + +k+  k  +kv k +++  +r   +++  +l+ln+v +D+s++P+PvCsCt +l
  OVA15865.1  65 HYNSREMHTNEAIPISAL---SSESPKP---RRGRRTKEHKDISSNKRALKLSRKVGKRGCNdlNRCSDPWRGYNLGLNHVYFDDSNMPAPVCSCTCVL 157
                 566788888888887763...3334444...46667777777777777778888888888776788999****************************** PP

   GAGA_bind 220 rqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLe 270
                 +qC kWG GGWqSaCCt t+S+yPL v++++r++ ++grKmS++af+klL+
  OVA15865.1 158 QQCCKWGKGGWQSACCTSTLSMYPLLVVPNKRHSQLGGRKMSGSAFNKLLS 208
                 **************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MLTVGFSAVF VILALSEKKA ALAEQDMAIR QQEQTISERN SAKMEQDNAL AALEYRGNST  60
VNSTHYNSRE MHTNEAIPIS ALSSESPKPR RGRRTKEHKD ISSNKRALKL SRKVGKRGCN  120
DLNRCSDPWR GYNLGLNHVY FDDSNMPAPV CSCTCVLQQC CKWGKGGWQS ACCTSTLSMY  180
PLLVVPNKRH SQLGGRKMSG SAFNKLLSWC LQKVMTCQHR LISRITGLDK GQIAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.21e-55BBR-BPC family protein