PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA15915.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 361aa MW: 39393.5 Da PI: 9.6328

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA15915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.2	2.2e-19	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I++ ++ gR++k+c++rw + OVA15915.1 16 KGPWSPEEDDALQKLVQKHGPRNWSLISQSIP-GRSGKSCRLRWCNQ 61 79****************************.*********985 PP
2	Myb_DNA-binding	55.5	1.3e-17	70	112	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ OVA15915.1 70 AFTAEEDETIIRAHAKFGNK-WATIARLLE-GRTDNAIKNHWNST 112 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MASSLSKKDR DQDRIKGPWS PEEDDALQKL VQKHGPRNWS LISQSIPGRS GKSCRLRWCN 60 QLSPQVEHRA FTAEEDETII RAHAKFGNKW ATIARLLEGR TDNAIKNHWN STLKRKCSSM 120 FEDGSDGGQE HRPLKRSVSL DAAPNVSGVR FSPGSPSGSD VSDSSLPVMS SSHVFRPVAR 180 TGGILPPAQL EISSPPTNDP PTSLSLSLPG TELCEPSKHG SGSNSATINP EPNQHLQHVL 240 PPPVPLRRPS PPLVQRTSPP LAPLVQRTSP PLAPLVQRSS PPLPLVQHNQ LSELGSEVTP 300 REAEKPFAPF SAEFLSVMQE MIKKEVRNYM SGLEQQNGMC FQGDGGIRNV GVKRIGVSKI 360 D

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MASSLSKKDR DQDRIKGPWS PEEDDALQKL VQKHGPRNWS LISQSIPGRS GKSCRLRWCN  60
QLSPQVEHRA FTAEEDETII RAHAKFGNKW ATIARLLEGR TDNAIKNHWN STLKRKCSSM  120
FEDGSDGGQE HRPLKRSVSL DAAPNVSGVR FSPGSPSGSD VSDSSLPVMS SSHVFRPVAR  180
TGGILPPAQL EISSPPTNDP PTSLSLSLPG TELCEPSKHG SGSNSATINP EPNQHLQHVL  240
PPPVPLRRPS PPLVQRTSPP LAPLVQRTSP PLAPLVQRSS PPLPLVQHNQ LSELGSEVTP  300
REAEKPFAPF SAEFLSVMQE MIKKEVRNYM SGLEQQNGMC FQGDGGIRNV GVKRIGVSKI  360
D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	1e-78	MYB family protein