PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16047.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 582aa    MW: 64796.8 Da    PI: 4.9597
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.53.2e-1392125821374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l+e+L++cA+avs++dl  a++l+ +l++++s +g+p+qRl ay++e+L arla+++s +ykal+++e +   s+e l+++++++ev+P++kf+++ aN
  OVA16047.1 212 LKEVLISCAKAVSDNDLITANQLIGELRNMVSVSGEPIQRLGAYMLEGLVARLASTGSCIYKALRCKEPA---SAELLSYMHILYEVCPYFKFGYMSAN 307
                 5789*****************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI eav+ e+r+HiiDf+i qG QW++L+qaLa+Rp+gpp +RiTg+++++s   +   l+ +g+rL+++Ae++++pfefn+ +a +  d+el++L v
  OVA16047.1 308 GAIAEAVKDEHRIHIIDFQIAQGSQWITLMQALAARPGGPPFIRITGIDDSNSAyaRGGGLQIVGQRLSRLAENCKIPFEFNA-AAVSGVDVELSSLGV 405
                 **************************************************988899999************************.899999********* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEa+aVn+++ lh+++desvs++++rd++L+l+kslsPkvv++veqe+++n+++F+ rfle+l+yy+a+f+s++++lpr+++eri++E+++l+r++v
  OVA16047.1 406 RPGEAIAVNFAYVLHHMPDESVSTQNHRDRLLRLIKSLSPKVVTLVEQESNTNTAPFFPRFLETLSYYTAMFESIDVTLPRDHKERINIEQHCLARDVV 504
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++acegaer+erhe l+kW++r+++aGF+p+pls+ +++++k+ll+++ ++ yr+ee++g+l+lgW+dr+Lv+ +aWr
  OVA16047.1 505 NIIACEGAERVERHEVLGKWKARFTMAGFTPYPLSSVVNSTIKTLLENYCEK-YRLEERDGALYLGWMDRNLVASCAWR 582
                 **************************************************55.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MSSQLRSESG FSRKDYQYYS GFPVTGLSQL VGYSSMQASQ KQGGSGGSHS LYYQELESNC  60
LPQNIRTLDE HHFTDESSQG VHYPSQTSNE QYCTLESSSA TGGCTVYNTP STVSFSPNGS  120
PLSQQESHTY PPEPNHSPYD TYGSPISLSC ITDNENDMWN KLKELETAML GPDSDIMDSS  180
DSTFQDGLNL DQSSLETESW NQMMEMMPRR DLKEVLISCA KAVSDNDLIT ANQLIGELRN  240
MVSVSGEPIQ RLGAYMLEGL VARLASTGSC IYKALRCKEP ASAELLSYMH ILYEVCPYFK  300
FGYMSANGAI AEAVKDEHRI HIIDFQIAQG SQWITLMQAL AARPGGPPFI RITGIDDSNS  360
AYARGGGLQI VGQRLSRLAE NCKIPFEFNA AAVSGVDVEL SSLGVRPGEA IAVNFAYVLH  420
HMPDESVSTQ NHRDRLLRLI KSLSPKVVTL VEQESNTNTA PFFPRFLETL SYYTAMFESI  480
DVTLPRDHKE RINIEQHCLA RDVVNIIACE GAERVERHEV LGKWKARFTM AGFTPYPLSS  540
VVNSTIKTLL ENYCEKYRLE ERDGALYLGW MDRNLVASCA WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein