PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16071.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 251aa MW: 28522.5 Da PI: 8.4938

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	40.5	4.8e-13	124	157	23	56
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRakek 56 r s+++++ LAk+l+L rqV vWFqNrRa+ k OVA16071.1 124 RIFSRKQKQALAKRLNLRPRQVEVWFQNRRARTK 157 56799***************************98 PP
2	HD-ZIP_I/II	88.6	7.5e-29	118	190	16	88
HD-ZIP_I/II 16 esFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 e+ e+e+ + ++K++la++L+l+prqv+vWFqnrRARtk+kq+E d+e++k+++++l+een+rL+ke +eL+ OVA16071.1 118 EEVETERIFSRKQKQALAKRLNLRPRQVEVWFQNRRARTKLKQTEIDCEFMKKCCEKLTEENRRLQKELQELK 190 45667778899************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGFGDVCNTG LSLGLGYELR LEESVLKSDH HDHQHQKSFF KFNQMFNPSI TTPTTSLEPS 60 LTLGLLDETY ELAAGNKMDM KKAHEESIDH VHRQSSPHNT VSSFSNTSVK REKDLVSEEV 120 ETERIFSRKQ KQALAKRLNL RPRQVEVWFQ NRRARTKLKQ TEIDCEFMKK CCEKLTEENR 180 RLQKELQELK GIKLGPPLYM QLPASALTMC PSCERINGGG VGENSSKTPF SMMAPKSNFF 240 NPFSHPPSAA C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	160	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	4e-57	HD-ZIP family protein