PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16175.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 224aa    MW: 25621.9 Da    PI: 8.109
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.12.6e-2752142190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fYn+Y+k++GF++r+++ ++s++++ i+ r++vCskeg+r++++   +++   +r++tr gCka+++v  ++ g+w vtk+  eHnH+l+
  OVA16175.1  52 EFYNAYGKRMGFTIRTNRIRHSQKSRAIIARDYVCSKEGFRSTKHALrKDRILPPRPTTREGCKAMIRVAVKDGGQWIVTKFIGEHNHKLM 142
                 6*****************************************9998823334459**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MASIDGQLDS CDSSTDLNNE IRVSTMQDLN ANPDPVEPYI GMSFKSVDDA REFYNAYGKR  60
MGFTIRTNRI RHSQKSRAII ARDYVCSKEG FRSTKHALRK DRILPPRPTT REGCKAMIRV  120
AVKDGGQWIV TKFIGEHNHK LMTRNKAPGE QFKASLLSEA EKDKKIEDLF NELQHEKQRT  180
AGFREQLYMV LSDIEEHAQH ISVRVQDVVN NVRELESSEE GGLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.19e-44FAR1 family protein