PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA16326.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MIKC_MADS

Protein Properties

Length: 224aa MW: 25971.4 Da PI: 9.2473

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA16326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.1	8.7e-32	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+ OVA16326.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59 79***********************************************95 PP
2	K-box	112.5	4.3e-37	76	173	3	100
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +s+++s ea+a ++qqe++kL+++i+ Lq+++Rhl+G++L+sL++keL+qLe++Le++l++iRskK+e+l+++ie++q++e elq+en+ Lr+k++e OVA16326.1 76 SSNTTSIVEANAHYYQQEATKLRQQIQILQNSNRHLMGDSLNSLTVKELKQLENRLERGLSRIRSKKHEMLFAEIEYMQRREVELQKENMFLRTKIAE 173 45566689999************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYSNS 60 SIKTTIERYK KACADSSNTT SIVEANAHYY QQEATKLRQQ IQILQNSNRH LMGDSLNSLT 120 VKELKQLENR LERGLSRIRS KKHEMLFAEI EYMQRREVEL QKENMFLRTK IAENENAEQQ 180 TSMVPAPEFD PIQTYDSRNY FHVNMLDGGP SSYSHPDQTA LHLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09960.1	1e-109	MIKC_MADS family protein