PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA16366.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 172aa    MW: 19963.7 Da    PI: 9.2387
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA16366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.92.3e-171560247
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                +i  k +r++tfskR++g +KK +ELS+LC+a+ a+++fs+ +k +
  OVA16366.1 15 KITRKDRREITFSKRKTGHFKKPSELSTLCGAKTAIVVFSPANKPF 60
                688899***********************************99855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MEKKTQGRKK IAMEKITRKD RREITFSKRK TGHFKKPSEL STLCGAKTAI VVFSPANKPF  60
SFKHPSVDSV SDQFLASNSP SKVGVSSTIE PSFGDYYRSA NINKFNRQVT EAMNLLEEEE  120
DQGKKLTEIE KDEFKERFLW NSPLEYLQYY ELEQLKVSME ELKTKVYKEG EE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-33M-type_MADS family protein